Bay area R meetup (July 21, SJSU)
Details
Registration: https://bbsw-tickets.ticketleap.com/summer-r-day2/
(Registration fee: $50; $20 for students). Registration deadline: July 9
Agenda: https://www.bbsw.org/meetup-events
| 09:00-09:30 | Registration |
| ----------- | ------------ |
| | Speaker: Michael Lawrence, Director, Genentech |
| 10:30-10:45 | Icebreaker and social |
| 10:45-11:00 | Break |
| 11:00-12:00 | Invited Session: R in pre-clinical and genomic research. Chair: Anqi Zhu (Genentech) |
| | The crisprVerse: a comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologies - Jean-Philippe Fortin, Principal Scientist Bioinformatics, Genentech
The code-teractive analysis of omics data with the facielbio ecosystem - Steve Lianoglou, Chief Collaborative Officer, Aratus Informatics
Visualizing scRNA-Seq Data at Population Scale with GloScope - William Torous, PhD Student, UC Berkeley |
| 12:00-13:00 | Lunch & Networking |
| 13:00-14:00 | Invited Session: R in Health Care. Chair: Jeni Zhou (Gilead) |
| | R E2E in Pharma Clinical Reporting - Li Zheng, Global Head of Analytical Data Science, Genentech
Automated generation of tables and figures using MS Word/PowerPoint and R - Owen Hall, Senior Statistical Analyst, Adela
Introduction to the ASA BIOP Software Engineering Working Group and the {mmrm} Package - Ya Wang, Senior Manager of Biostatistics, Gilead |
| 14:00-14:15 | Break |
| 14:15-15:15 | Invited Session: Reproducibility in R. Chair: Daniel Sjoberg |
| | Levels of Reproducible Analysis - Siddhartha Bagaria, Staff Software Engineer, Google
Scaling Code Quality with Static Analysis Tools - Michael Chirico, Senior Data Scientist, Google
Beyond Re-Execution - Reframing and Generalizing Computational Reproducibility - Gabe Becker, Consultant |
| 15:15-15:25 | Raffle |
| 15:25-15:30 | Closing
Michael Lawrence (Genentech) |
| 15:30-16:00 | Social |