September Double Header: Connecting R/RMarkdown & Microsoft Word using StatTag

R-Ladies Chicago
R-Ladies Chicago
Public group

Mudd Library

2233 Tech Dr · Evanston, IL

How to find us

Second floor - Room 2210

Location image of event venue

Details

**Note: This is one of two events happening this month for our Northside-Southside double header, one in Hyde Park on 9/24, and another in Evanston on 9/26. Choose one or attend both!**

Dr. Leah Welty will present: "Collaborative Reproducibility: Connecting R/R Markdown and Microsoft Word using StatTag"

Although R Markdown can render documents to Microsoft Word, R/R Markdown users must sometimes transcribe statistical content in to separate Microsoft Word documents (e.g., documents drafted by colleagues in Word, or documents that must be prepared in Word), a process that is error prone, irreproducible, and inefficient. We will present StatTag (www.stattag.org), an open source, free, and user-friendly program we developed to address this problem. StatTag establishes a bi-directional link between R/RMarkdown files and a Word document, and supports a reproducible pipeline even when: (1) statistical results must be included and updated in Word documents that were never generated from Markdown; and (2) text in Word files generated from R/RMarkdown has departed substantially from original Markdown content, for example through tracked changes or comments. We will demonstrate how to use StatTag to connect R/RMarkdown and Word files so that all files can be edited separately, but statistical content –values, tables, figures, and verbatim output– can be updated automatically in Word. Using practical examples, we will also illustrate how to use StatTag to view, edit, and rerun R/RMarkdown code directly from Word. The talk will also include an overview of reproducible research in the collaborative research.

About the Speaker
Leah J. Welty, PhD is Professor in the Division of Biostatistics, Department of Preventive Medicine and in the Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, and is the Director of the Biostatistics Collaboration Center within the Northwestern University Clinical and Translational Sciences Institute. She is also the Immediate Past President of the Association of Clinical and Translational Statisticians. She earned her PhD in statistics from the University of Chicago, and completed a postdoctoral fellowship in the Department of Biostatistics at Johns Hopkins University Bloomberg School of Public Health. Her research interests include longitudinal and multilevel models, psychiatric epidemiology, and the development of reproducible research tools for clinical and translational science. She is the lead biostatistician for the Northwestern Juvenile Project, a large-scale longitudinal study of psychiatric disorders and risky behaviors in delinquent youth. She has led the development of StatTag, a free, open-source program to support reproducible research in clinical and translational science.

Schedule
4:30-5pm - Food, Intros & Announcements
5-6pm - StatTag
6-6:30pm - Socializing/Networking

**This event is child-friendly!
We realize this is an earlier start time than our normal events and strive to make it accessible to all. Any parents are welcome to bring their children. There will be a child-friendly activity at this event. Please email [masked] if you have any questions.

Q: Are men welcome to attend this event?
A: Our primary mission is to encourage more women & non-binary individuals to get involved in the R community. **As such, we strongly encourage that all men who attend this event have a female or non-binary sponsor. Please contact [masked] if you have questions.**

Additionally, please help us by spreading the word about R-Ladies, and by being respectful of the fact that this event is primarily for women/non-binary/female-identifying individuals.

• Important to know
We expect all attendees to abide & be governed by our community code of conduct. Please take a moment to review our R-Ladies Global code of conduct (particularly if this is your first time attending!): https://github.com/rladies/starter-kit/wiki/Code-of-Conduct